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Cluster: GH191_maxbin.025_sub_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_311932 k141_311932_16 14266 16275 + 1.B.52.2.1
CAZyme k141_311932 k141_311932_17 16375 18276 - GH13_14
CAZyme k141_311932 k141_311932_18 18291 19937 - GH13_36
TF k141_311932 k141_311932_19 19934 20965 - LacI
TC k141_311932 k141_311932_20 20990 21865 - 3.A.1.1.27
TC k141_311932 k141_311932_21 21865 23361 - 3.A.1.1.27
TC k141_311932 k141_311932_22 23614 24912 - 3.A.1.1.27
CAZyme k141_311932 k141_311932_23 25320 27680 - GT35
CAZyme k141_311932 k141_311932_24 27702 29216 - GH77
TF k141_311932 k141_311932_25 29240 30235 - LacI
NULL(UNKNOWN) k141_311932 k141_311932_26 30328 30525 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_311932 k141_311932_27 30590 33913 + GH2
Gene ID: k141_311932_16
Type: TC
Location: 14266 - 16275 (+)
Gene ID: k141_311932_17
Type: CAZyme
Location: 16375 - 18276 (-)
Gene ID: k141_311932_18
Type: CAZyme
Location: 18291 - 19937 (-)
Gene ID: k141_311932_19
Type: TF
Location: 19934 - 20965 (-)
Gene ID: k141_311932_20
Type: TC
Location: 20990 - 21865 (-)
Gene ID: k141_311932_21
Type: TC
Location: 21865 - 23361 (-)
Gene ID: k141_311932_22
Type: TC
Location: 23614 - 24912 (-)
Gene ID: k141_311932_23
Type: CAZyme
Location: 25320 - 27680 (-)
Gene ID: k141_311932_24
Type: CAZyme
Location: 27702 - 29216 (-)
Gene ID: k141_311932_25
Type: TF
Location: 29240 - 30235 (-)
Gene ID: k141_311932_26
Type:
Location: 30328 - 30525 (-)
Gene ID: k141_311932_27
Type: CAZyme
Location: 30590 - 33913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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