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Cluster: GH191_12_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_260286 k141_260286_32 43191 43946 - 1.B.42.1.2
pfam k141_260286 k141_260286_33 44030 44656 - PRK
TC k141_260286 k141_260286_34 44852 45601 + 3.A.1.27.2
TC k141_260286 k141_260286_35 45598 46356 + 3.A.1.27.5
TC k141_260286 k141_260286_36 46464 47528 + 8.A.1.6.2
TC k141_260286 k141_260286_37 47525 50641 + 2.A.6.2.38
pfam k141_260286 k141_260286_38 50638 51975 + OEP | OEP
CAZyme k141_260286 k141_260286_39 52078 53505 - GH13_37
Gene ID: k141_260286_32
Type: TC
Location: 43191 - 43946 (-)
Gene ID: k141_260286_33
Type: pfam
Location: 44030 - 44656 (-)
Gene ID: k141_260286_34
Type: TC
Location: 44852 - 45601 (+)
Gene ID: k141_260286_35
Type: TC
Location: 45598 - 46356 (+)
Gene ID: k141_260286_36
Type: TC
Location: 46464 - 47528 (+)
Gene ID: k141_260286_37
Type: TC
Location: 47525 - 50641 (+)
Gene ID: k141_260286_38
Type: pfam
Location: 50638 - 51975 (+)
Gene ID: k141_260286_39
Type: CAZyme
Location: 52078 - 53505 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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