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Cluster: GH190_46_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_386817 k141_386817_1 295 1443 - 3.A.1.1.24
CAZyme k141_386817 k141_386817_2 1446 2945 - GH31_19
CAZyme k141_386817 k141_386817_3 2947 4917 - GH3
CAZyme k141_386817 k141_386817_4 4914 6110 - GH37
pfam k141_386817 k141_386817_5 6167 7780 - Big_2
pfam k141_386817 k141_386817_6 7808 9466 - Bmp
TC k141_386817 k141_386817_7 9471 10406 - 3.A.1.1.9
TC k141_386817 k141_386817_8 10416 11354 - 3.A.1.1.9
TC k141_386817 k141_386817_9 11356 12999 - 3.A.1.1.9
TF k141_386817 k141_386817_10 13107 14279 - HTH_AraC | HTH_AraC
TC k141_386817 k141_386817_11 14283 15983 - 8.A.59.2.1
Gene ID: k141_386817_1
Type: TC
Location: 295 - 1443 (-)
Gene ID: k141_386817_2
Type: CAZyme
Location: 1446 - 2945 (-)
Gene ID: k141_386817_3
Type: CAZyme
Location: 2947 - 4917 (-)
Gene ID: k141_386817_4
Type: CAZyme
Location: 4914 - 6110 (-)
Gene ID: k141_386817_5
Type: pfam
Location: 6167 - 7780 (-)
Gene ID: k141_386817_6
Type: pfam
Location: 7808 - 9466 (-)
Gene ID: k141_386817_7
Type: TC
Location: 9471 - 10406 (-)
Gene ID: k141_386817_8
Type: TC
Location: 10416 - 11354 (-)
Gene ID: k141_386817_9
Type: TC
Location: 11356 - 12999 (-)
Gene ID: k141_386817_10
Type: TF
Location: 13107 - 14279 (-)
Gene ID: k141_386817_11
Type: TC
Location: 14283 - 15983 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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