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Cluster: GH190_46_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_78393 k141_78393_1 255 983 - 3.A.1.1.24
NULL(UNKNOWN) k141_78393 k141_78393_2 973 1833 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_78393 k141_78393_3 1836 3578 - GH2
TF k141_78393 k141_78393_4 3678 4568 + HTH_AraC
pfam k141_78393 k141_78393_5 4519 5130 + HTH_30
TC k141_78393 k141_78393_6 5186 6550 + 3.A.1.1.28
Gene ID: k141_78393_1
Type: TC
Location: 255 - 983 (-)
Gene ID: k141_78393_2
Type:
Location: 973 - 1833 (-)
Gene ID: k141_78393_3
Type: CAZyme
Location: 1836 - 3578 (-)
Gene ID: k141_78393_4
Type: TF
Location: 3678 - 4568 (+)
Gene ID: k141_78393_5
Type: pfam
Location: 4519 - 5130 (+)
Gene ID: k141_78393_6
Type: TC
Location: 5186 - 6550 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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