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Cluster: GH190_46_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_9822 k141_9822_1 1 3306 - GH148
NULL(UNKNOWN) k141_9822 k141_9822_2 3310 5151 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_9822 k141_9822_3 5157 6959 - Glyco_hydro_42
TC k141_9822 k141_9822_4 6966 8630 - 3.A.1.1.10
TC k141_9822 k141_9822_5 8655 9551 - 3.A.1.1.29
TC k141_9822 k141_9822_6 9558 10520 - 3.A.1.1.10
CAZyme k141_9822 k141_9822_7 10669 11517 + CE4
NULL(UNKNOWN) k141_9822 k141_9822_8 11536 12381 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_9822 k141_9822_9 12378 13673 - GH1
TC k141_9822 k141_9822_10 13670 14953 - 3.A.1.1.26
Gene ID: k141_9822_1
Type: CAZyme
Location: 1 - 3306 (-)
Gene ID: k141_9822_2
Type:
Location: 3310 - 5151 (-)
Gene ID: k141_9822_3
Type: pfam
Location: 5157 - 6959 (-)
Gene ID: k141_9822_4
Type: TC
Location: 6966 - 8630 (-)
Gene ID: k141_9822_5
Type: TC
Location: 8655 - 9551 (-)
Gene ID: k141_9822_6
Type: TC
Location: 9558 - 10520 (-)
Gene ID: k141_9822_7
Type: CAZyme
Location: 10669 - 11517 (+)
Gene ID: k141_9822_8
Type:
Location: 11536 - 12381 (+)
Gene ID: k141_9822_9
Type: CAZyme
Location: 12378 - 13673 (-)
Gene ID: k141_9822_10
Type: TC
Location: 13670 - 14953 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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