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Cluster: GH190_46_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_49398 k141_49398_1 2 1795 - GH39
TC k141_49398 k141_49398_2 1978 3558 + 3.A.1.2.20
TC k141_49398 k141_49398_3 3568 4560 + 3.A.1.2.25
NULL(UNKNOWN) k141_49398 k141_49398_4 4593 5729 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_49398 k141_49398_5 5781 6791 + BPD_transp_2
CAZyme k141_49398 k141_49398_6 6794 8488 + GH3
Gene ID: k141_49398_1
Type: CAZyme
Location: 2 - 1795 (-)
Gene ID: k141_49398_2
Type: TC
Location: 1978 - 3558 (+)
Gene ID: k141_49398_3
Type: TC
Location: 3568 - 4560 (+)
Gene ID: k141_49398_4
Type:
Location: 4593 - 5729 (+)
Gene ID: k141_49398_5
Type: pfam
Location: 5781 - 6791 (+)
Gene ID: k141_49398_6
Type: CAZyme
Location: 6794 - 8488 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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