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Cluster: GH182_100_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_180274 k141_180274_4 3344 4114 + 3.A.1.134.4
TC k141_180274 k141_180274_5 4392 6446 + 3.A.1.134.9
STP k141_180274 k141_180274_6 6552 7922 + GAF | GGDEF
TC k141_180274 k141_180274_7 7952 9646 + 3.A.18.1.1
NULL(UNKNOWN) k141_180274 k141_180274_8 10205 10333 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_180274 k141_180274_9 10330 11115 + 2.A.5.5.2
CAZyme k141_180274 k141_180274_10 11144 12679 + GH28
pfam k141_180274 k141_180274_11 12842 14002 + Phosphonate-bd
TC k141_180274 k141_180274_12 14126 14893 + 3.A.1.9.2
TC k141_180274 k141_180274_13 14905 15759 + 3.A.1.24.4
TC k141_180274 k141_180274_14 15828 16694 + 3.A.1.9.1
STP k141_180274 k141_180274_15 16820 19135 + EAL | GGDEF
NULL(UNKNOWN) k141_180274 k141_180274_16 19151 19441 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_180274 k141_180274_17 19745 20815 + 3.A.1.15.3
TC k141_180274 k141_180274_18 20815 21651 + 3.A.1.15.14
TC k141_180274 k141_180274_19 21644 22462 + 3.A.1.15.15
CAZyme k141_180274 k141_180274_20 22512 23615 + GH105
Gene ID: k141_180274_4
Type: TC
Location: 3344 - 4114 (+)
Gene ID: k141_180274_5
Type: TC
Location: 4392 - 6446 (+)
Gene ID: k141_180274_6
Type: STP
Location: 6552 - 7922 (+)
Gene ID: k141_180274_7
Type: TC
Location: 7952 - 9646 (+)
Gene ID: k141_180274_8
Type:
Location: 10205 - 10333 (+)
Gene ID: k141_180274_9
Type: TC
Location: 10330 - 11115 (+)
Gene ID: k141_180274_10
Type: CAZyme
Location: 11144 - 12679 (+)
Gene ID: k141_180274_11
Type: pfam
Location: 12842 - 14002 (+)
Gene ID: k141_180274_12
Type: TC
Location: 14126 - 14893 (+)
Gene ID: k141_180274_13
Type: TC
Location: 14905 - 15759 (+)
Gene ID: k141_180274_14
Type: TC
Location: 15828 - 16694 (+)
Gene ID: k141_180274_15
Type: STP
Location: 16820 - 19135 (+)
Gene ID: k141_180274_16
Type:
Location: 19151 - 19441 (+)
Gene ID: k141_180274_17
Type: TC
Location: 19745 - 20815 (+)
Gene ID: k141_180274_18
Type: TC
Location: 20815 - 21651 (+)
Gene ID: k141_180274_19
Type: TC
Location: 21644 - 22462 (+)
Gene ID: k141_180274_20
Type: CAZyme
Location: 22512 - 23615 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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