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Cluster: GH182_100_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_95148 k141_95148_13 11195 11425 + 3.D.1.6.4
pfam k141_95148 k141_95148_14 11533 12222 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
pfam k141_95148 k141_95148_15 12262 15843 + SMC_N | SMC_hinge | AAA_15 | AAA_23
TC k141_95148 k141_95148_16 15927 16853 + 3.A.5.1.1
STP k141_95148 k141_95148_17 16949 18172 + ACT | PALP
TC k141_95148 k141_95148_18 18191 19531 + 2.A.38.4.1
TC k141_95148 k141_95148_19 19551 20204 + 2.A.38.4.6
CAZyme k141_95148 k141_95148_20 20224 21879 + CBM91 | GH43_10
pfam k141_95148 k141_95148_21 22134 23618 + Fucose_iso_C
pfam k141_95148 k141_95148_22 23774 25234 + FGGY_N | FGGY_C
TC k141_95148 k141_95148_23 25263 27287 + 3.A.1.121.4
pfam k141_95148 k141_95148_24 27284 28297 + Dus
TC k141_95148 k141_95148_25 28430 29767 + 2.A.40.7.6
Gene ID: k141_95148_13
Type: TC
Location: 11195 - 11425 (+)
Gene ID: k141_95148_14
Type: pfam
Location: 11533 - 12222 (+)
Gene ID: k141_95148_15
Type: pfam
Location: 12262 - 15843 (+)
Gene ID: k141_95148_16
Type: TC
Location: 15927 - 16853 (+)
Gene ID: k141_95148_17
Type: STP
Location: 16949 - 18172 (+)
Gene ID: k141_95148_18
Type: TC
Location: 18191 - 19531 (+)
Gene ID: k141_95148_19
Type: TC
Location: 19551 - 20204 (+)
Gene ID: k141_95148_20
Type: CAZyme
Location: 20224 - 21879 (+)
Gene ID: k141_95148_21
Type: pfam
Location: 22134 - 23618 (+)
Gene ID: k141_95148_22
Type: pfam
Location: 23774 - 25234 (+)
Gene ID: k141_95148_23
Type: TC
Location: 25263 - 27287 (+)
Gene ID: k141_95148_24
Type: pfam
Location: 27284 - 28297 (+)
Gene ID: k141_95148_25
Type: TC
Location: 28430 - 29767 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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