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Cluster: GH182_100_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_173744 k141_173744_78 90506 92236 - 1.B.52.2.1
STP k141_173744 k141_173744_79 92248 93501 - SBP_bac_1
TC k141_173744 k141_173744_80 93805 95499 + 8.A.59.4.1
CAZyme k141_173744 k141_173744_81 95566 101871 - PL11_1
TC k141_173744 k141_173744_82 102097 102729 - 3.A.1.210.10
peptidase k141_173744 k141_173744_83 103037 104830 - M24.UPB
TC k141_173744 k141_173744_84 105059 106966 - 3.A.1.135.5
TC k141_173744 k141_173744_85 106966 108726 - 3.A.1.135.5
TF k141_173744 k141_173744_86 108720 109181 - MarR
pfam k141_173744 k141_173744_87 109348 110181 - Acyltransferase
CAZyme k141_173744 k141_173744_88 110181 111401 - GT2
CAZyme k141_173744 k141_173744_89 111841 112656 - GT8
Gene ID: k141_173744_78
Type: TC
Location: 90506 - 92236 (-)
Gene ID: k141_173744_79
Type: STP
Location: 92248 - 93501 (-)
Gene ID: k141_173744_80
Type: TC
Location: 93805 - 95499 (+)
Gene ID: k141_173744_81
Type: CAZyme
Location: 95566 - 101871 (-)
Gene ID: k141_173744_82
Type: TC
Location: 102097 - 102729 (-)
Gene ID: k141_173744_83
Type: peptidase
Location: 103037 - 104830 (-)
Gene ID: k141_173744_84
Type: TC
Location: 105059 - 106966 (-)
Gene ID: k141_173744_85
Type: TC
Location: 106966 - 108726 (-)
Gene ID: k141_173744_86
Type: TF
Location: 108720 - 109181 (-)
Gene ID: k141_173744_87
Type: pfam
Location: 109348 - 110181 (-)
Gene ID: k141_173744_88
Type: CAZyme
Location: 110181 - 111401 (-)
Gene ID: k141_173744_89
Type: CAZyme
Location: 111841 - 112656 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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