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Cluster: GH182_100_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_249429 k141_249429_14 17137 20010 - GH2
TF k141_249429 k141_249429_15 19986 21374 - GntR
CAZyme k141_249429 k141_249429_16 21685 22941 - GH27
pfam k141_249429 k141_249429_17 23034 23669 + PRK
pfam k141_249429 k141_249429_18 23670 24158 - LuxS
TC k141_249429 k141_249429_19 24298 25089 + 2.A.79.1.5
TC k141_249429 k141_249429_20 25166 25627 + 2.A.79.1.6
pfam k141_249429 k141_249429_21 25846 27087 + Patatin
TC k141_249429 k141_249429_22 27295 29931 - 3.A.1.122.13
Gene ID: k141_249429_14
Type: CAZyme
Location: 17137 - 20010 (-)
Gene ID: k141_249429_15
Type: TF
Location: 19986 - 21374 (-)
Gene ID: k141_249429_16
Type: CAZyme
Location: 21685 - 22941 (-)
Gene ID: k141_249429_17
Type: pfam
Location: 23034 - 23669 (+)
Gene ID: k141_249429_18
Type: pfam
Location: 23670 - 24158 (-)
Gene ID: k141_249429_19
Type: TC
Location: 24298 - 25089 (+)
Gene ID: k141_249429_20
Type: TC
Location: 25166 - 25627 (+)
Gene ID: k141_249429_21
Type: pfam
Location: 25846 - 27087 (+)
Gene ID: k141_249429_22
Type: TC
Location: 27295 - 29931 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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