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Cluster: GH182_100_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_148878 k141_148878_39 60223 62187 - CE12
TF k141_148878 k141_148878_40 62226 63149 - HTH_AraC | HTH_AraC
TC k141_148878 k141_148878_41 63542 64501 + 3.A.1.1.29
TC k141_148878 k141_148878_42 64515 65426 + 3.A.1.1.29
STP k141_148878 k141_148878_43 65530 67281 + SBP_bac_1
CAZyme k141_148878 k141_148878_44 67590 68642 + GH105
CAZyme k141_148878 k141_148878_45 68734 70881 + GH112
pfam k141_148878 k141_148878_46 71340 71768 + HIT
TC k141_148878 k141_148878_47 71788 73152 + 3.A.24.3.1
pfam k141_148878 k141_148878_48 73315 74496 + FKBP_C | Trigger_C
STP k141_148878 k141_148878_49 74652 76130 + GGDEF
TC k141_148878 k141_148878_50 76191 77348 + 2.A.4.7.9
NULL(UNKNOWN) k141_148878 k141_148878_51 77549 77905 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_148878 k141_148878_52 77999 78175 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_148878 k141_148878_53 78231 79364 - 2.A.45.2.6
NULL(UNKNOWN) k141_148878 k141_148878_54 79367 79636 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_148878 k141_148878_55 79871 80899 + 9.A.23.1.1
Gene ID: k141_148878_39
Type: CAZyme
Location: 60223 - 62187 (-)
Gene ID: k141_148878_40
Type: TF
Location: 62226 - 63149 (-)
Gene ID: k141_148878_41
Type: TC
Location: 63542 - 64501 (+)
Gene ID: k141_148878_42
Type: TC
Location: 64515 - 65426 (+)
Gene ID: k141_148878_43
Type: STP
Location: 65530 - 67281 (+)
Gene ID: k141_148878_44
Type: CAZyme
Location: 67590 - 68642 (+)
Gene ID: k141_148878_45
Type: CAZyme
Location: 68734 - 70881 (+)
Gene ID: k141_148878_46
Type: pfam
Location: 71340 - 71768 (+)
Gene ID: k141_148878_47
Type: TC
Location: 71788 - 73152 (+)
Gene ID: k141_148878_48
Type: pfam
Location: 73315 - 74496 (+)
Gene ID: k141_148878_49
Type: STP
Location: 74652 - 76130 (+)
Gene ID: k141_148878_50
Type: TC
Location: 76191 - 77348 (+)
Gene ID: k141_148878_51
Type:
Location: 77549 - 77905 (+)
Gene ID: k141_148878_52
Type:
Location: 77999 - 78175 (+)
Gene ID: k141_148878_53
Type: TC
Location: 78231 - 79364 (-)
Gene ID: k141_148878_54
Type:
Location: 79367 - 79636 (-)
Gene ID: k141_148878_55
Type: TC
Location: 79871 - 80899 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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