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Cluster: GH182_100_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_215042 k141_215042_384 415193 417991 - GH5_4
TC k141_215042 k141_215042_385 417991 418611 - 9.B.28.1.2
pfam k141_215042 k141_215042_386 418695 420407 - SBP_bac_1
TC k141_215042 k141_215042_387 420470 421432 - 3.A.1.1.29
TC k141_215042 k141_215042_388 421444 422895 - 3.A.1.1.29
NULL(UNKNOWN) k141_215042 k141_215042_389 423116 424939 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_215042 k141_215042_390 425074 427005 - 8.A.59.2.1
CAZyme k141_215042 k141_215042_391 427302 429596 + GH31_3
Gene ID: k141_215042_384
Type: CAZyme
Location: 415193 - 417991 (-)
Gene ID: k141_215042_385
Type: TC
Location: 417991 - 418611 (-)
Gene ID: k141_215042_386
Type: pfam
Location: 418695 - 420407 (-)
Gene ID: k141_215042_387
Type: TC
Location: 420470 - 421432 (-)
Gene ID: k141_215042_388
Type: TC
Location: 421444 - 422895 (-)
Gene ID: k141_215042_389
Type:
Location: 423116 - 424939 (-)
Gene ID: k141_215042_390
Type: TC
Location: 425074 - 427005 (-)
Gene ID: k141_215042_391
Type: CAZyme
Location: 427302 - 429596 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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