Cluster: GH182_100_CGC12
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 6
- Substrate:
- Genome ID: GH182_100
- CGC Family ID: CGCFAM_07733
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_12808 | k141_12808_8 | 4498 | 6336 | - | PL33_1 |
| TF | k141_12808 | k141_12808_9 | 6373 | 7989 | - | HTH_AraC | HTH_AraC |
| TC | k141_12808 | k141_12808_10 | 8015 | 9802 | - | 8.A.59.2.1 |
| STP | k141_12808 | k141_12808_11 | 10092 | 11468 | + | SBP_bac_1 |
| TC | k141_12808 | k141_12808_12 | 11551 | 12603 | + | 3.A.1.1.23 |
| TC | k141_12808 | k141_12808_13 | 12619 | 13467 | + | 3.A.1.1.11 |
| CAZyme | k141_12808 | k141_12808_14 | 13546 | 14745 | + | GH88 |
| pfam | k141_12808 | k141_12808_15 | 14789 | 15424 | + | DUF624 |
| pfam | k141_12808 | k141_12808_16 | 15406 | 16194 | + | DUF7402 |
| TC | k141_12808 | k141_12808_17 | 16383 | 17963 | + | 1.B.52.2.1 |
| pfam | k141_12808 | k141_12808_18 | 18072 | 18590 | - | CarD_TRCF_RID |
| NULL(UNKNOWN) | k141_12808 | k141_12808_19 | 18832 | 19374 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_12808 | k141_12808_20 | 19437 | 20558 | + | CE12 |
| pfam | k141_12808 | k141_12808_21 | 20539 | 20718 | + | DUF6472 |
| pfam | k141_12808 | k141_12808_22 | 20771 | 21646 | + | DegV |
| CAZyme | k141_12808 | k141_12808_23 | 21693 | 22112 | + | CE4 |
| TF | k141_12808 | k141_12808_24 | 22244 | 23101 | - | HTH_AraC | HTH_AraC |
| pfam | k141_12808 | k141_12808_25 | 23544 | 26879 | + | TPR_6 | DUF5107 |
| CAZyme | k141_12808 | k141_12808_26 | 26906 | 29044 | + | GH35 |
| CAZyme | k141_12808 | k141_12808_27 | 29145 | 31121 | + | GH31_4 |
Gene ID: k141_12808_8
Type: CAZyme
Location: 4498 - 6336 (-)
Type: CAZyme
Location: 4498 - 6336 (-)
Gene ID: k141_12808_9
Type: TF
Location: 6373 - 7989 (-)
Type: TF
Location: 6373 - 7989 (-)
Gene ID: k141_12808_10
Type: TC
Location: 8015 - 9802 (-)
Type: TC
Location: 8015 - 9802 (-)
Gene ID: k141_12808_11
Type: STP
Location: 10092 - 11468 (+)
Type: STP
Location: 10092 - 11468 (+)
Gene ID: k141_12808_12
Type: TC
Location: 11551 - 12603 (+)
Type: TC
Location: 11551 - 12603 (+)
Gene ID: k141_12808_13
Type: TC
Location: 12619 - 13467 (+)
Type: TC
Location: 12619 - 13467 (+)
Gene ID: k141_12808_14
Type: CAZyme
Location: 13546 - 14745 (+)
Type: CAZyme
Location: 13546 - 14745 (+)
Gene ID: k141_12808_15
Type: pfam
Location: 14789 - 15424 (+)
Type: pfam
Location: 14789 - 15424 (+)
Gene ID: k141_12808_16
Type: pfam
Location: 15406 - 16194 (+)
Type: pfam
Location: 15406 - 16194 (+)
Gene ID: k141_12808_17
Type: TC
Location: 16383 - 17963 (+)
Type: TC
Location: 16383 - 17963 (+)
Gene ID: k141_12808_18
Type: pfam
Location: 18072 - 18590 (-)
Type: pfam
Location: 18072 - 18590 (-)
Gene ID: k141_12808_19
Type:
Location: 18832 - 19374 (+)
Type:
Location: 18832 - 19374 (+)
Gene ID: k141_12808_20
Type: CAZyme
Location: 19437 - 20558 (+)
Type: CAZyme
Location: 19437 - 20558 (+)
Gene ID: k141_12808_21
Type: pfam
Location: 20539 - 20718 (+)
Type: pfam
Location: 20539 - 20718 (+)
Gene ID: k141_12808_22
Type: pfam
Location: 20771 - 21646 (+)
Type: pfam
Location: 20771 - 21646 (+)
Gene ID: k141_12808_23
Type: CAZyme
Location: 21693 - 22112 (+)
Type: CAZyme
Location: 21693 - 22112 (+)
Gene ID: k141_12808_24
Type: TF
Location: 22244 - 23101 (-)
Type: TF
Location: 22244 - 23101 (-)
Gene ID: k141_12808_25
Type: pfam
Location: 23544 - 26879 (+)
Type: pfam
Location: 23544 - 26879 (+)
Gene ID: k141_12808_26
Type: CAZyme
Location: 26906 - 29044 (+)
Type: CAZyme
Location: 26906 - 29044 (+)
Gene ID: k141_12808_27
Type: CAZyme
Location: 29145 - 31121 (+)
Type: CAZyme
Location: 29145 - 31121 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-882
Species
CAG-882 sp934351925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.