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Cluster: GH178_42_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_290824 k141_290824_34 50338 52281 - 3.A.3.5.15
NULL(UNKNOWN) k141_290824 k141_290824_35 52467 58400 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_290824 k141_290824_36 58663 60753 - Dockerin_1
TC k141_290824 k141_290824_37 60870 62204 - 2.A.66.1.13
CAZyme k141_290824 k141_290824_38 62298 64007 - GH13_44
Gene ID: k141_290824_34
Type: TC
Location: 50338 - 52281 (-)
Gene ID: k141_290824_35
Type:
Location: 52467 - 58400 (-)
Gene ID: k141_290824_36
Type: pfam
Location: 58663 - 60753 (-)
Gene ID: k141_290824_37
Type: TC
Location: 60870 - 62204 (-)
Gene ID: k141_290824_38
Type: CAZyme
Location: 62298 - 64007 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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