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Cluster: GH177_0_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_26289 k141_26289_14 21765 22715 + 3.A.1.1.29
TC k141_26289 k141_26289_15 22728 23660 + 3.A.1.1.29
pfam k141_26289 k141_26289_16 23756 25207 + DUF3502
CAZyme k141_26289 k141_26289_17 25319 26608 + GH125
pfam k141_26289 k141_26289_18 26997 27518 + VanZ
pfam k141_26289 k141_26289_19 27586 29280 + PDDEXK_9 | AAA-ATPase_like
TC k141_26289 k141_26289_20 29409 30098 + 2.A.78.1.1
TC k141_26289 k141_26289_21 30095 30418 + 2.A.78.1.1
Gene ID: k141_26289_14
Type: TC
Location: 21765 - 22715 (+)
Gene ID: k141_26289_15
Type: TC
Location: 22728 - 23660 (+)
Gene ID: k141_26289_16
Type: pfam
Location: 23756 - 25207 (+)
Gene ID: k141_26289_17
Type: CAZyme
Location: 25319 - 26608 (+)
Gene ID: k141_26289_18
Type: pfam
Location: 26997 - 27518 (+)
Gene ID: k141_26289_19
Type: pfam
Location: 27586 - 29280 (+)
Gene ID: k141_26289_20
Type: TC
Location: 29409 - 30098 (+)
Gene ID: k141_26289_21
Type: TC
Location: 30095 - 30418 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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