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Cluster: GH177_0_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_46837 k141_46837_28 42765 46097 - CBM67 | GH78
pfam k141_46837 k141_46837_29 46284 46901 + Flavodoxin_2 | FMN_red
TC k141_46837 k141_46837_30 47622 48503 - 3.A.1.1.9
TC k141_46837 k141_46837_31 48522 49451 - 3.A.1.1.9
TC k141_46837 k141_46837_32 49553 51253 - 3.A.1.1.9
NULL(UNKNOWN) k141_46837 k141_46837_33 51250 51432 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_46837 k141_46837_34 51624 53147 + HTH_AraC | HTH_AraC
TC k141_46837 k141_46837_35 53144 54808 + 8.A.59.2.1
Gene ID: k141_46837_28
Type: CAZyme
Location: 42765 - 46097 (-)
Gene ID: k141_46837_29
Type: pfam
Location: 46284 - 46901 (+)
Gene ID: k141_46837_30
Type: TC
Location: 47622 - 48503 (-)
Gene ID: k141_46837_31
Type: TC
Location: 48522 - 49451 (-)
Gene ID: k141_46837_32
Type: TC
Location: 49553 - 51253 (-)
Gene ID: k141_46837_33
Type:
Location: 51250 - 51432 (-)
Gene ID: k141_46837_34
Type: TF
Location: 51624 - 53147 (+)
Gene ID: k141_46837_35
Type: TC
Location: 53144 - 54808 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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