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Cluster: GH177_0_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40047 k141_40047_26 29806 30606 + 3.A.1.104.1
TC k141_40047 k141_40047_27 30616 31947 + 3.A.1.103.6
pfam k141_40047 k141_40047_28 31978 32901 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
NULL(UNKNOWN) k141_40047 k141_40047_29 32906 34273 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_40047 k141_40047_30 34276 35247 + GT2
CAZyme k141_40047 k141_40047_31 35266 36507 + GT4
pfam k141_40047 k141_40047_32 36488 37921 + PMT_2
CAZyme k141_40047 k141_40047_33 38046 40157 + GT4
peptidase k141_40047 k141_40047_34 40255 41568 - S11.UPW
CAZyme k141_40047 k141_40047_35 41962 43806 + GT2 | GT2
CAZyme k141_40047 k141_40047_36 43794 44768 + GT2
TC k141_40047 k141_40047_37 44960 46369 + 9.B.18.1.1
pfam k141_40047 k141_40047_38 46389 47585 + LytR_cpsA_psr
CAZyme k141_40047 k141_40047_39 47608 48561 + GT2
Gene ID: k141_40047_26
Type: TC
Location: 29806 - 30606 (+)
Gene ID: k141_40047_27
Type: TC
Location: 30616 - 31947 (+)
Gene ID: k141_40047_28
Type: pfam
Location: 31978 - 32901 (+)
Gene ID: k141_40047_29
Type:
Location: 32906 - 34273 (+)
Gene ID: k141_40047_30
Type: CAZyme
Location: 34276 - 35247 (+)
Gene ID: k141_40047_31
Type: CAZyme
Location: 35266 - 36507 (+)
Gene ID: k141_40047_32
Type: pfam
Location: 36488 - 37921 (+)
Gene ID: k141_40047_33
Type: CAZyme
Location: 38046 - 40157 (+)
Gene ID: k141_40047_34
Type: peptidase
Location: 40255 - 41568 (-)
Gene ID: k141_40047_35
Type: CAZyme
Location: 41962 - 43806 (+)
Gene ID: k141_40047_36
Type: CAZyme
Location: 43794 - 44768 (+)
Gene ID: k141_40047_37
Type: TC
Location: 44960 - 46369 (+)
Gene ID: k141_40047_38
Type: pfam
Location: 46389 - 47585 (+)
Gene ID: k141_40047_39
Type: CAZyme
Location: 47608 - 48561 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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