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Cluster: GH177_0_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_174424 k141_174424_56 72267 73997 + 8.A.59.2.1
TC k141_174424 k141_174424_57 73994 75739 + 3.A.1.1.9
pfam k141_174424 k141_174424_58 76029 77342 + SBP_bac_8
TC k141_174424 k141_174424_59 77444 78817 + 3.A.1.1.27
TC k141_174424 k141_174424_60 78817 79695 + 3.A.1.1.27
CAZyme k141_174424 k141_174424_61 79879 83853 + GH133 | GH13_14
Gene ID: k141_174424_56
Type: TC
Location: 72267 - 73997 (+)
Gene ID: k141_174424_57
Type: TC
Location: 73994 - 75739 (+)
Gene ID: k141_174424_58
Type: pfam
Location: 76029 - 77342 (+)
Gene ID: k141_174424_59
Type: TC
Location: 77444 - 78817 (+)
Gene ID: k141_174424_60
Type: TC
Location: 78817 - 79695 (+)
Gene ID: k141_174424_61
Type: CAZyme
Location: 79879 - 83853 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_174424_59 vegan > omnivore 1.01280 0.01867

🧭 Explore Read Mapping of CGC

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