dbCAN Logo

Cluster: GH177_0_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_39824 k141_39824_8 8932 9867 + 3.A.1.1.32
TC k141_39824 k141_39824_9 9882 10721 + 3.A.1.1.41
CAZyme k141_39824 k141_39824_10 10761 14147 + GH31_3
CAZyme k141_39824 k141_39824_11 14271 15938 + GH66
CAZyme k141_39824 k141_39824_12 15977 17317 + GH27
CAZyme k141_39824 k141_39824_13 17319 19028 + GH13_20
CAZyme k141_39824 k141_39824_14 19054 22422 + GH31_3
CAZyme k141_39824 k141_39824_15 22652 24109 - GH29
TC k141_39824 k141_39824_16 24544 25536 + 3.A.1.23.5
pfam k141_39824 k141_39824_17 25560 26330 + CbiQ
TC k141_39824 k141_39824_18 26442 27182 + 3.A.1.23.5
TC k141_39824 k141_39824_19 27393 28733 - 2.A.66.1.28
Gene ID: k141_39824_8
Type: TC
Location: 8932 - 9867 (+)
Gene ID: k141_39824_9
Type: TC
Location: 9882 - 10721 (+)
Gene ID: k141_39824_10
Type: CAZyme
Location: 10761 - 14147 (+)
Gene ID: k141_39824_11
Type: CAZyme
Location: 14271 - 15938 (+)
Gene ID: k141_39824_12
Type: CAZyme
Location: 15977 - 17317 (+)
Gene ID: k141_39824_13
Type: CAZyme
Location: 17319 - 19028 (+)
Gene ID: k141_39824_14
Type: CAZyme
Location: 19054 - 22422 (+)
Gene ID: k141_39824_15
Type: CAZyme
Location: 22652 - 24109 (-)
Gene ID: k141_39824_16
Type: TC
Location: 24544 - 25536 (+)
Gene ID: k141_39824_17
Type: pfam
Location: 25560 - 26330 (+)
Gene ID: k141_39824_18
Type: TC
Location: 26442 - 27182 (+)
Gene ID: k141_39824_19
Type: TC
Location: 27393 - 28733 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_39824_8 vegan > omnivore 1.33737 0.01867
k141_39824_10 vegan > omnivore 1.25271 0.01867
k141_39824_11 vegan > omnivore 1.67514 0.01867
k141_39824_12 vegan > omnivore 1.26884 0.01867
k141_39824_13 vegan > omnivore 1.15787 0.01867
k141_39824_19 vegetarian > vegan 1.05012 0.00290

🧭 Explore Read Mapping of CGC

← Back to Cluster List