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Cluster: GH177_0_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_39664 k141_39664_26 19353 21077 - GH2
TF k141_39664 k141_39664_27 21259 21810 + SpoVT_AbrB
TC k141_39664 k141_39664_28 21925 22869 + 3.A.1.5.32
TC k141_39664 k141_39664_29 22886 23689 + 3.A.1.5.27
TC k141_39664 k141_39664_30 23691 24527 + 3.A.1.5.19
TC k141_39664 k141_39664_31 24531 25262 + 3.A.1.5.27
peptidase k141_39664 k141_39664_32 25345 26328 - M19.UPW
TC k141_39664 k141_39664_33 26516 27913 + 2.A.25.1.9
Gene ID: k141_39664_26
Type: CAZyme
Location: 19353 - 21077 (-)
Gene ID: k141_39664_27
Type: TF
Location: 21259 - 21810 (+)
Gene ID: k141_39664_28
Type: TC
Location: 21925 - 22869 (+)
Gene ID: k141_39664_29
Type: TC
Location: 22886 - 23689 (+)
Gene ID: k141_39664_30
Type: TC
Location: 23691 - 24527 (+)
Gene ID: k141_39664_31
Type: TC
Location: 24531 - 25262 (+)
Gene ID: k141_39664_32
Type: peptidase
Location: 25345 - 26328 (-)
Gene ID: k141_39664_33
Type: TC
Location: 26516 - 27913 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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