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Cluster: GH177_0_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_43696 k141_43696_18 19263 21467 - GH3
TF k141_43696 k141_43696_19 21642 22457 + HTH_AraC | HTH_AraC
TC k141_43696 k141_43696_20 22470 23159 - 2.A.106.1.3
TC k141_43696 k141_43696_21 23173 24174 - 2.A.19.5.2
Gene ID: k141_43696_18
Type: CAZyme
Location: 19263 - 21467 (-)
Gene ID: k141_43696_19
Type: TF
Location: 21642 - 22457 (+)
Gene ID: k141_43696_20
Type: TC
Location: 22470 - 23159 (-)
Gene ID: k141_43696_21
Type: TC
Location: 23173 - 24174 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_43696_21 vegetarian > vegan 1.07704 0.00290

🧭 Explore Read Mapping of CGC

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