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Cluster: GH177_0_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_43696 k141_43696_7 5063 6130 - GH43_24
STP k141_43696 k141_43696_8 6359 7957 + SBP_bac_1
TC k141_43696 k141_43696_9 8031 8951 + 3.A.1.1.9
TC k141_43696 k141_43696_10 8969 9862 + 3.A.1.1.29
TF k141_43696 k141_43696_11 10012 10803 - HTH_AraC | HTH_AraC
STP k141_43696 k141_43696_12 10805 12526 - HATPase_c
CAZyme k141_43696 k141_43696_13 12930 15206 + CBM67 | GH78
Gene ID: k141_43696_7
Type: CAZyme
Location: 5063 - 6130 (-)
Gene ID: k141_43696_8
Type: STP
Location: 6359 - 7957 (+)
Gene ID: k141_43696_9
Type: TC
Location: 8031 - 8951 (+)
Gene ID: k141_43696_10
Type: TC
Location: 8969 - 9862 (+)
Gene ID: k141_43696_11
Type: TF
Location: 10012 - 10803 (-)
Gene ID: k141_43696_12
Type: STP
Location: 10805 - 12526 (-)
Gene ID: k141_43696_13
Type: CAZyme
Location: 12930 - 15206 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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