Cluster: GH165_maxbin.008_sub_CGC53
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 20
- Substrate: xylan
- Genome ID: GH165_maxbin.008_sub
- CGC Family ID: CGCFAM_00273
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_98963 | k141_98963_214 | 237732 | 240482 | - | PL40 |
| TF | k141_98963 | k141_98963_215 | 240577 | 244659 | - | HTH_AraC |
| TC | k141_98963 | k141_98963_216 | 245150 | 248212 | + | 1.B.14.6.1 |
| pfam | k141_98963 | k141_98963_217 | 248230 | 250185 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_98963 | k141_98963_218 | 250278 | 252737 | + | GH115 |
| CAZyme | k141_98963 | k141_98963_219 | 252751 | 254775 | + | GH67 |
| CAZyme | k141_98963 | k141_98963_220 | 254894 | 256765 | - | CE20 | CE20 |
| CAZyme | k141_98963 | k141_98963_221 | 257040 | 259019 | - | GH120 |
| pfam | k141_98963 | k141_98963_222 | 259087 | 261282 | - | Glyco_hydro_20b |
| NULL(UNKNOWN) | k141_98963 | k141_98963_223 | 261493 | 261615 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_98963 | k141_98963_224 | 261581 | 263290 | + | GH35 |
| CAZyme | k141_98963 | k141_98963_225 | 263507 | 265138 | + | CE20 | CE20 |
| TC | k141_98963 | k141_98963_226 | 265184 | 266680 | + | 2.A.2.3.4 |
| CAZyme | k141_98963 | k141_98963_227 | 266705 | 267847 | + | GH10 |
| CAZyme | k141_98963 | k141_98963_228 | 267886 | 268857 | + | GH43_1 |
| CAZyme | k141_98963 | k141_98963_229 | 268928 | 270922 | + | GH67 |
| TF | k141_98963 | k141_98963_230 | 270986 | 275074 | + | HTH_AraC |
| CAZyme | k141_98963 | k141_98963_231 | 275085 | 277667 | - | GH115 |
| CAZyme | k141_98963 | k141_98963_232 | 277680 | 279269 | - | CBM91 | GH43_10 |
| CAZyme | k141_98963 | k141_98963_233 | 279286 | 281223 | - | CE1 | CE6 |
| CAZyme | k141_98963 | k141_98963_234 | 281347 | 282573 | - | CE15 |
| CAZyme | k141_98963 | k141_98963_235 | 282642 | 284186 | - | CBM91 | GH43_12 |
| TF | k141_98963 | k141_98963_236 | 284530 | 287640 | + | HTH_AraC |
| CAZyme | k141_98963 | k141_98963_237 | 287750 | 289114 | + | CBM6 | GH43_29 |
| CAZyme | k141_98963 | k141_98963_238 | 289139 | 291592 | + | GH31_4 |
| CAZyme | k141_98963 | k141_98963_239 | 291707 | 294292 | + | GH115 |
| CAZyme | k141_98963 | k141_98963_240 | 294396 | 296003 | - | CBM91 | GH43_10 |
| CAZyme | k141_98963 | k141_98963_241 | 296255 | 297409 | - | CE1 |
Gene ID: k141_98963_214
Type: CAZyme
Location: 237732 - 240482 (-)
Type: CAZyme
Location: 237732 - 240482 (-)
Gene ID: k141_98963_215
Type: TF
Location: 240577 - 244659 (-)
Type: TF
Location: 240577 - 244659 (-)
Gene ID: k141_98963_216
Type: TC
Location: 245150 - 248212 (+)
Type: TC
Location: 245150 - 248212 (+)
Gene ID: k141_98963_217
Type: pfam
Location: 248230 - 250185 (+)
Type: pfam
Location: 248230 - 250185 (+)
Gene ID: k141_98963_218
Type: CAZyme
Location: 250278 - 252737 (+)
Type: CAZyme
Location: 250278 - 252737 (+)
Gene ID: k141_98963_219
Type: CAZyme
Location: 252751 - 254775 (+)
Type: CAZyme
Location: 252751 - 254775 (+)
Gene ID: k141_98963_220
Type: CAZyme
Location: 254894 - 256765 (-)
Type: CAZyme
Location: 254894 - 256765 (-)
Gene ID: k141_98963_221
Type: CAZyme
Location: 257040 - 259019 (-)
Type: CAZyme
Location: 257040 - 259019 (-)
Gene ID: k141_98963_222
Type: pfam
Location: 259087 - 261282 (-)
Type: pfam
Location: 259087 - 261282 (-)
Gene ID: k141_98963_223
Type:
Location: 261493 - 261615 (+)
Type:
Location: 261493 - 261615 (+)
Gene ID: k141_98963_224
Type: CAZyme
Location: 261581 - 263290 (+)
Type: CAZyme
Location: 261581 - 263290 (+)
Gene ID: k141_98963_225
Type: CAZyme
Location: 263507 - 265138 (+)
Type: CAZyme
Location: 263507 - 265138 (+)
Gene ID: k141_98963_226
Type: TC
Location: 265184 - 266680 (+)
Type: TC
Location: 265184 - 266680 (+)
Gene ID: k141_98963_227
Type: CAZyme
Location: 266705 - 267847 (+)
Type: CAZyme
Location: 266705 - 267847 (+)
Gene ID: k141_98963_228
Type: CAZyme
Location: 267886 - 268857 (+)
Type: CAZyme
Location: 267886 - 268857 (+)
Gene ID: k141_98963_229
Type: CAZyme
Location: 268928 - 270922 (+)
Type: CAZyme
Location: 268928 - 270922 (+)
Gene ID: k141_98963_230
Type: TF
Location: 270986 - 275074 (+)
Type: TF
Location: 270986 - 275074 (+)
Gene ID: k141_98963_231
Type: CAZyme
Location: 275085 - 277667 (-)
Type: CAZyme
Location: 275085 - 277667 (-)
Gene ID: k141_98963_232
Type: CAZyme
Location: 277680 - 279269 (-)
Type: CAZyme
Location: 277680 - 279269 (-)
Gene ID: k141_98963_233
Type: CAZyme
Location: 279286 - 281223 (-)
Type: CAZyme
Location: 279286 - 281223 (-)
Gene ID: k141_98963_234
Type: CAZyme
Location: 281347 - 282573 (-)
Type: CAZyme
Location: 281347 - 282573 (-)
Gene ID: k141_98963_235
Type: CAZyme
Location: 282642 - 284186 (-)
Type: CAZyme
Location: 282642 - 284186 (-)
Gene ID: k141_98963_236
Type: TF
Location: 284530 - 287640 (+)
Type: TF
Location: 284530 - 287640 (+)
Gene ID: k141_98963_237
Type: CAZyme
Location: 287750 - 289114 (+)
Type: CAZyme
Location: 287750 - 289114 (+)
Gene ID: k141_98963_238
Type: CAZyme
Location: 289139 - 291592 (+)
Type: CAZyme
Location: 289139 - 291592 (+)
Gene ID: k141_98963_239
Type: CAZyme
Location: 291707 - 294292 (+)
Type: CAZyme
Location: 291707 - 294292 (+)
Gene ID: k141_98963_240
Type: CAZyme
Location: 294396 - 296003 (-)
Type: CAZyme
Location: 294396 - 296003 (-)
Gene ID: k141_98963_241
Type: CAZyme
Location: 296255 - 297409 (-)
Type: CAZyme
Location: 296255 - 297409 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.