Cluster: GH164_bin.62_CGC2
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: GH164_bin.62
- CGC Family ID: CGCFAM_01078
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_74882 | k141_74882_17 | 26153 | 29323 | + | 1.B.14.6.1 |
| TC | k141_74882 | k141_74882_18 | 29391 | 31043 | + | 8.A.46.1.3 |
| pfam | k141_74882 | k141_74882_19 | 31312 | 32577 | + | Big_2 | Big_2 | Big-like | Big-like |
| CAZyme | k141_74882 | k141_74882_20 | 32641 | 33936 | + | GH16_3 |
| CAZyme | k141_74882 | k141_74882_21 | 33940 | 35478 | + | GH128 |
| CAZyme | k141_74882 | k141_74882_22 | 35491 | 36534 | + | GH16_3 |
| pfam | k141_74882 | k141_74882_23 | 36817 | 37269 | + | Por_Secre_tail |
| pfam | k141_74882 | k141_74882_24 | 37302 | 38372 | + | Big_2 |
| CAZyme | k141_74882 | k141_74882_25 | 38449 | 39435 | + | GH16_3 |
| TC | k141_74882 | k141_74882_26 | 39505 | 40863 | + | 2.A.2.3.6 |
| CAZyme | k141_74882 | k141_74882_27 | 41007 | 44444 | + | GH149 |
| CAZyme | k141_74882 | k141_74882_28 | 44460 | 46805 | + | GH3 |
| NULL(UNKNOWN) | k141_74882 | k141_74882_29 | 46967 | 47554 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_74882 | k141_74882_30 | 47644 | 50085 | + | CBM32 |
Gene ID: k141_74882_17
Type: TC
Location: 26153 - 29323 (+)
Type: TC
Location: 26153 - 29323 (+)
Gene ID: k141_74882_18
Type: TC
Location: 29391 - 31043 (+)
Type: TC
Location: 29391 - 31043 (+)
Gene ID: k141_74882_19
Type: pfam
Location: 31312 - 32577 (+)
Type: pfam
Location: 31312 - 32577 (+)
Gene ID: k141_74882_20
Type: CAZyme
Location: 32641 - 33936 (+)
Type: CAZyme
Location: 32641 - 33936 (+)
Gene ID: k141_74882_21
Type: CAZyme
Location: 33940 - 35478 (+)
Type: CAZyme
Location: 33940 - 35478 (+)
Gene ID: k141_74882_22
Type: CAZyme
Location: 35491 - 36534 (+)
Type: CAZyme
Location: 35491 - 36534 (+)
Gene ID: k141_74882_23
Type: pfam
Location: 36817 - 37269 (+)
Type: pfam
Location: 36817 - 37269 (+)
Gene ID: k141_74882_24
Type: pfam
Location: 37302 - 38372 (+)
Type: pfam
Location: 37302 - 38372 (+)
Gene ID: k141_74882_25
Type: CAZyme
Location: 38449 - 39435 (+)
Type: CAZyme
Location: 38449 - 39435 (+)
Gene ID: k141_74882_26
Type: TC
Location: 39505 - 40863 (+)
Type: TC
Location: 39505 - 40863 (+)
Gene ID: k141_74882_27
Type: CAZyme
Location: 41007 - 44444 (+)
Type: CAZyme
Location: 41007 - 44444 (+)
Gene ID: k141_74882_28
Type: CAZyme
Location: 44460 - 46805 (+)
Type: CAZyme
Location: 44460 - 46805 (+)
Gene ID: k141_74882_29
Type:
Location: 46967 - 47554 (+)
Type:
Location: 46967 - 47554 (+)
Gene ID: k141_74882_30
Type: CAZyme
Location: 47644 - 50085 (+)
Type: CAZyme
Location: 47644 - 50085 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.