dbCAN Logo

Cluster: GH164_bin.62_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_299761 k141_299761_108 114234 115328 + GT4
CAZyme k141_299761 k141_299761_109 115325 116365 + GT4
pfam k141_299761 k141_299761_110 116376 117656 + Wzy_C
CAZyme k141_299761 k141_299761_111 117571 118443 - GT2
pfam k141_299761 k141_299761_112 118440 119153 - Kdo
CAZyme k141_299761 k141_299761_113 119144 120085 - GT9
pfam k141_299761 k141_299761_114 120138 120743 - DUF4254
TC k141_299761 k141_299761_115 120766 122418 + 2.A.21.5.5
STP k141_299761 k141_299761_116 122493 122825 - HMA
pfam k141_299761 k141_299761_117 122847 124211 - HipA_C
TC k141_299761 k141_299761_118 124556 126517 + 2.A.67.4.2
Gene ID: k141_299761_108
Type: CAZyme
Location: 114234 - 115328 (+)
Gene ID: k141_299761_109
Type: CAZyme
Location: 115325 - 116365 (+)
Gene ID: k141_299761_110
Type: pfam
Location: 116376 - 117656 (+)
Gene ID: k141_299761_111
Type: CAZyme
Location: 117571 - 118443 (-)
Gene ID: k141_299761_112
Type: pfam
Location: 118440 - 119153 (-)
Gene ID: k141_299761_113
Type: CAZyme
Location: 119144 - 120085 (-)
Gene ID: k141_299761_114
Type: pfam
Location: 120138 - 120743 (-)
Gene ID: k141_299761_115
Type: TC
Location: 120766 - 122418 (+)
Gene ID: k141_299761_116
Type: STP
Location: 122493 - 122825 (-)
Gene ID: k141_299761_117
Type: pfam
Location: 122847 - 124211 (-)
Gene ID: k141_299761_118
Type: TC
Location: 124556 - 126517 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Paludibacteraceae
→
Genus
RF16
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List