dbCAN Logo

Cluster: GH164_bin.62_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_299761 k141_299761_40 42818 44188 + 2.A.66.2.10
pfam k141_299761 k141_299761_41 44283 45455 + EpsG
CAZyme k141_299761 k141_299761_42 45463 46311 + GT2
pfam k141_299761 k141_299761_43 46304 47011 + Glycos_transf_2
CAZyme k141_299761 k141_299761_44 47013 47741 + GT2
CAZyme k141_299761 k141_299761_45 47731 48483 + GT2
pfam k141_299761 k141_299761_46 48484 49368 + Glycos_transf_2 | Glyco_tranf_2_3
TC k141_299761 k141_299761_47 49355 50806 - 1.B.73.2.2
pfam k141_299761 k141_299761_48 50820 51761 - Kelch_1 | Kelch_1 | Kelch_2 | Kelch_3 | Kelch_4 | Kelch_4 | Kelch_6 | Kelch_6 | Kelch_KLHDC2_KLHL20_DRC7
TC k141_299761 k141_299761_49 51848 52591 - 1.B.42.1.2
Gene ID: k141_299761_40
Type: TC
Location: 42818 - 44188 (+)
Gene ID: k141_299761_41
Type: pfam
Location: 44283 - 45455 (+)
Gene ID: k141_299761_42
Type: CAZyme
Location: 45463 - 46311 (+)
Gene ID: k141_299761_43
Type: pfam
Location: 46304 - 47011 (+)
Gene ID: k141_299761_44
Type: CAZyme
Location: 47013 - 47741 (+)
Gene ID: k141_299761_45
Type: CAZyme
Location: 47731 - 48483 (+)
Gene ID: k141_299761_46
Type: pfam
Location: 48484 - 49368 (+)
Gene ID: k141_299761_47
Type: TC
Location: 49355 - 50806 (-)
Gene ID: k141_299761_48
Type: pfam
Location: 50820 - 51761 (-)
Gene ID: k141_299761_49
Type: TC
Location: 51848 - 52591 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Paludibacteraceae
→
Genus
RF16
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List