Cluster: GH150_46_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: GH150_46
- CGC Family ID: CGCFAM_00472
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_241792 | k141_241792_17 | 12720 | 13430 | + | 3.A.16.1.3 |
| TC | k141_241792 | k141_241792_18 | 13546 | 14394 | - | 2.A.25.1.6 |
| peptidase | k141_241792 | k141_241792_19 | 14539 | 17610 | + | S08.UPA |
| TC | k141_241792 | k141_241792_20 | 17627 | 20998 | + | 2.A.1.42.2 |
| pfam | k141_241792 | k141_241792_21 | 21186 | 21425 | - | DUF2934 |
| CAZyme | k141_241792 | k141_241792_22 | 21643 | 23841 | + | CBM48 | GH13_9 |
| CAZyme | k141_241792 | k141_241792_23 | 23864 | 25951 | + | GH13_11 |
| CAZyme | k141_241792 | k141_241792_24 | 25952 | 28078 | + | GH77 |
| NULL(UNKNOWN) | k141_241792 | k141_241792_25 | 28187 | 28675 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_241792 | k141_241792_26 | 28733 | 29329 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_241792 | k141_241792_27 | 29457 | 30410 | - | 3.A.15.3.1 |
| TC | k141_241792 | k141_241792_28 | 30666 | 31889 | + | 1.B.9.1.1 |
Gene ID: k141_241792_17
Type: TC
Location: 12720 - 13430 (+)
Type: TC
Location: 12720 - 13430 (+)
Gene ID: k141_241792_18
Type: TC
Location: 13546 - 14394 (-)
Type: TC
Location: 13546 - 14394 (-)
Gene ID: k141_241792_19
Type: peptidase
Location: 14539 - 17610 (+)
Type: peptidase
Location: 14539 - 17610 (+)
Gene ID: k141_241792_20
Type: TC
Location: 17627 - 20998 (+)
Type: TC
Location: 17627 - 20998 (+)
Gene ID: k141_241792_21
Type: pfam
Location: 21186 - 21425 (-)
Type: pfam
Location: 21186 - 21425 (-)
Gene ID: k141_241792_22
Type: CAZyme
Location: 21643 - 23841 (+)
Type: CAZyme
Location: 21643 - 23841 (+)
Gene ID: k141_241792_23
Type: CAZyme
Location: 23864 - 25951 (+)
Type: CAZyme
Location: 23864 - 25951 (+)
Gene ID: k141_241792_24
Type: CAZyme
Location: 25952 - 28078 (+)
Type: CAZyme
Location: 25952 - 28078 (+)
Gene ID: k141_241792_25
Type:
Location: 28187 - 28675 (+)
Type:
Location: 28187 - 28675 (+)
Gene ID: k141_241792_26
Type:
Location: 28733 - 29329 (-)
Type:
Location: 28733 - 29329 (-)
Gene ID: k141_241792_27
Type: TC
Location: 29457 - 30410 (-)
Type: TC
Location: 29457 - 30410 (-)
Gene ID: k141_241792_28
Type: TC
Location: 30666 - 31889 (+)
Type: TC
Location: 30666 - 31889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
RUG410
Species
RUG410 sp934229625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.