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Cluster: GH148_21_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42013 k141_42013_1 146 1393 - 2.A.79.1.5
CAZyme k141_42013 k141_42013_2 1553 3154 + GH20
TC k141_42013 k141_42013_3 3141 4313 - 2.A.1.2.18
peptidase k141_42013 k141_42013_4 4623 5702 + C26.UPW
pfam k141_42013 k141_42013_5 5717 8956 + MGS | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C | ATPgrasp_Ter
TC k141_42013 k141_42013_6 9224 11131 - 3.A.6.1.1
TC k141_42013 k141_42013_7 11308 14094 - 1.B.42.1.8
pfam k141_42013 k141_42013_8 14161 15312 + Amidase_3
TC k141_42013 k141_42013_9 15316 16227 + 3.A.1.27.1
Gene ID: k141_42013_1
Type: TC
Location: 146 - 1393 (-)
Gene ID: k141_42013_2
Type: CAZyme
Location: 1553 - 3154 (+)
Gene ID: k141_42013_3
Type: TC
Location: 3141 - 4313 (-)
Gene ID: k141_42013_4
Type: peptidase
Location: 4623 - 5702 (+)
Gene ID: k141_42013_5
Type: pfam
Location: 5717 - 8956 (+)
Gene ID: k141_42013_6
Type: TC
Location: 9224 - 11131 (-)
Gene ID: k141_42013_7
Type: TC
Location: 11308 - 14094 (-)
Gene ID: k141_42013_8
Type: pfam
Location: 14161 - 15312 (+)
Gene ID: k141_42013_9
Type: TC
Location: 15316 - 16227 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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