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Cluster: GH148_21_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_280869 k141_280869_22 25526 27445 - GH13_46
CAZyme k141_280869 k141_280869_23 27460 29853 - GH31_15
CAZyme k141_280869 k141_280869_24 29864 31891 - GH13_46
pfam k141_280869 k141_280869_25 31857 33824 - SusD_RagB | SusD-like_3
TC k141_280869 k141_280869_26 33836 36799 - 1.B.14.6.1
TC k141_280869 k141_280869_27 36965 38335 + 9.B.33.1.2
TF k141_280869 k141_280869_28 38350 39120 + LytTR
TC k141_280869 k141_280869_29 39403 41592 - 3.A.10.1.10
NULL(UNKNOWN) k141_280869 k141_280869_30 41761 43458 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_280869 k141_280869_31 43543 44589 - Laminin_G_3
TC k141_280869 k141_280869_32 44615 46036 - 8.A.46.1.3
TC k141_280869 k141_280869_33 46050 49121 - 1.B.14.6.1
NULL(UNKNOWN) k141_280869 k141_280869_34 49132 50862 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_280869 k141_280869_35 50859 52112 - 2.A.1.33.2
CAZyme k141_280869 k141_280869_36 52119 53165 - GH130_4
Gene ID: k141_280869_22
Type: CAZyme
Location: 25526 - 27445 (-)
Gene ID: k141_280869_23
Type: CAZyme
Location: 27460 - 29853 (-)
Gene ID: k141_280869_24
Type: CAZyme
Location: 29864 - 31891 (-)
Gene ID: k141_280869_25
Type: pfam
Location: 31857 - 33824 (-)
Gene ID: k141_280869_26
Type: TC
Location: 33836 - 36799 (-)
Gene ID: k141_280869_27
Type: TC
Location: 36965 - 38335 (+)
Gene ID: k141_280869_28
Type: TF
Location: 38350 - 39120 (+)
Gene ID: k141_280869_29
Type: TC
Location: 39403 - 41592 (-)
Gene ID: k141_280869_30
Type:
Location: 41761 - 43458 (-)
Gene ID: k141_280869_31
Type: pfam
Location: 43543 - 44589 (-)
Gene ID: k141_280869_32
Type: TC
Location: 44615 - 46036 (-)
Gene ID: k141_280869_33
Type: TC
Location: 46050 - 49121 (-)
Gene ID: k141_280869_34
Type:
Location: 49132 - 50862 (-)
Gene ID: k141_280869_35
Type: TC
Location: 50859 - 52112 (-)
Gene ID: k141_280869_36
Type: CAZyme
Location: 52119 - 53165 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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