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Cluster: GH148_21_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_142361 k141_142361_108 147456 149600 + GH50
CAZyme k141_142361 k141_142361_109 149627 151120 + CE20
TC k141_142361 k141_142361_110 151273 153900 + 9.B.144.1.4
CAZyme k141_142361 k141_142361_111 153909 155270 - GT4
pfam k141_142361 k141_142361_112 155538 158210 + MutS_V | MutS_I | MutS_II | MutS_IV | MutS_III
CAZyme k141_142361 k141_142361_113 158250 160259 + GH97
pfam k141_142361 k141_142361_114 160270 161097 + ThiF
NULL(UNKNOWN) k141_142361 k141_142361_115 161581 163488 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_142361 k141_142361_116 163742 164812 - 3.A.1.132.3
Gene ID: k141_142361_108
Type: CAZyme
Location: 147456 - 149600 (+)
Gene ID: k141_142361_109
Type: CAZyme
Location: 149627 - 151120 (+)
Gene ID: k141_142361_110
Type: TC
Location: 151273 - 153900 (+)
Gene ID: k141_142361_111
Type: CAZyme
Location: 153909 - 155270 (-)
Gene ID: k141_142361_112
Type: pfam
Location: 155538 - 158210 (+)
Gene ID: k141_142361_113
Type: CAZyme
Location: 158250 - 160259 (+)
Gene ID: k141_142361_114
Type: pfam
Location: 160270 - 161097 (+)
Gene ID: k141_142361_115
Type:
Location: 161581 - 163488 (-)
Gene ID: k141_142361_116
Type: TC
Location: 163742 - 164812 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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