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Cluster: GH139_maxbin.013_sub_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_5750 k141_5750_47 57153 60281 - GH3
CAZyme k141_5750 k141_5750_48 60464 62959 - GH2
pfam k141_5750 k141_5750_49 63053 63304 - DUF6783
CAZyme k141_5750 k141_5750_50 63333 64634 - CE1
TC k141_5750 k141_5750_51 64917 65738 - 3.A.1.1.45
TC k141_5750 k141_5750_52 65735 66616 - 3.A.1.1.7
STP k141_5750 k141_5750_53 66737 68053 - SBP_bac_1
TC k141_5750 k141_5750_54 68408 70237 + 8.A.59.2.1
TF k141_5750 k141_5750_55 70259 71002 + HTH_AraC | HTH_AraC
CAZyme k141_5750 k141_5750_56 71214 73928 - GH95
CAZyme k141_5750 k141_5750_57 73973 76339 - GH31_4
Gene ID: k141_5750_47
Type: CAZyme
Location: 57153 - 60281 (-)
Gene ID: k141_5750_48
Type: CAZyme
Location: 60464 - 62959 (-)
Gene ID: k141_5750_49
Type: pfam
Location: 63053 - 63304 (-)
Gene ID: k141_5750_50
Type: CAZyme
Location: 63333 - 64634 (-)
Gene ID: k141_5750_51
Type: TC
Location: 64917 - 65738 (-)
Gene ID: k141_5750_52
Type: TC
Location: 65735 - 66616 (-)
Gene ID: k141_5750_53
Type: STP
Location: 66737 - 68053 (-)
Gene ID: k141_5750_54
Type: TC
Location: 68408 - 70237 (+)
Gene ID: k141_5750_55
Type: TF
Location: 70259 - 71002 (+)
Gene ID: k141_5750_56
Type: CAZyme
Location: 71214 - 73928 (-)
Gene ID: k141_5750_57
Type: CAZyme
Location: 73973 - 76339 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_5750_51 vegan > omnivore 1.15282 0.00694
k141_5750_52 vegan > omnivore 1.66056 0.00694

🧭 Explore Read Mapping of CGC

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