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Cluster: GH139_maxbin.013_sub_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_140243 k141_140243_5 5787 7724 - GH2
TC k141_140243 k141_140243_6 8080 9441 + 2.A.66.1.33
TC k141_140243 k141_140243_7 9502 11367 + 3.A.1.120.6
pfam k141_140243 k141_140243_8 11360 12940 + Aminotran_5 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP | SelA | Se-cys_synth_N
pfam k141_140243 k141_140243_9 12979 13632 - rhaM | rhaM
TC k141_140243 k141_140243_10 14250 15620 + 2.A.66.1.13
CAZyme k141_140243 k141_140243_11 15693 18128 - GH94
TF k141_140243 k141_140243_12 18698 19726 + LacI
NULL(UNKNOWN) k141_140243 k141_140243_13 19770 21122 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_140243 k141_140243_14 21356 22336 + 3.A.1.1.4
TC k141_140243 k141_140243_15 22333 23205 + 3.A.1.1.3
TC k141_140243 k141_140243_16 23523 24161 + 1.A.62.2.1
TC k141_140243 k141_140243_17 24186 26018 + 3.A.1.120.6
TC k141_140243 k141_140243_18 26155 27882 - 1.A.11.2.7
Gene ID: k141_140243_5
Type: CAZyme
Location: 5787 - 7724 (-)
Gene ID: k141_140243_6
Type: TC
Location: 8080 - 9441 (+)
Gene ID: k141_140243_7
Type: TC
Location: 9502 - 11367 (+)
Gene ID: k141_140243_8
Type: pfam
Location: 11360 - 12940 (+)
Gene ID: k141_140243_9
Type: pfam
Location: 12979 - 13632 (-)
Gene ID: k141_140243_10
Type: TC
Location: 14250 - 15620 (+)
Gene ID: k141_140243_11
Type: CAZyme
Location: 15693 - 18128 (-)
Gene ID: k141_140243_12
Type: TF
Location: 18698 - 19726 (+)
Gene ID: k141_140243_13
Type:
Location: 19770 - 21122 (+)
Gene ID: k141_140243_14
Type: TC
Location: 21356 - 22336 (+)
Gene ID: k141_140243_15
Type: TC
Location: 22333 - 23205 (+)
Gene ID: k141_140243_16
Type: TC
Location: 23523 - 24161 (+)
Gene ID: k141_140243_17
Type: TC
Location: 24186 - 26018 (+)
Gene ID: k141_140243_18
Type: TC
Location: 26155 - 27882 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_140243_15 vegetarian > omnivore 1.04040 0.04303

🧭 Explore Read Mapping of CGC

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