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Cluster: GH139_maxbin.013_sub_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_116203 k141_116203_38 45018 46583 + GH25
pfam k141_116203 k141_116203_39 46775 47329 + dTDP_sugar_isom
TC k141_116203 k141_116203_40 47340 48155 + 3.A.1.104.1
TC k141_116203 k141_116203_41 48274 49527 + 3.A.1.103.6
pfam k141_116203 k141_116203_42 49534 50463 + PCMT | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
NULL(UNKNOWN) k141_116203 k141_116203_43 50460 51695 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_116203 k141_116203_44 51697 54171 + GT2 | GT2
peptidase k141_116203 k141_116203_45 54235 55488 - S11.UPW
CAZyme k141_116203 k141_116203_46 55751 57619 + GT2 | GT2
CAZyme k141_116203 k141_116203_47 57629 58585 + GT2
TC k141_116203 k141_116203_48 58814 60217 + 9.B.18.1.1
pfam k141_116203 k141_116203_49 60232 61620 + LytR_cpsA_psr
CAZyme k141_116203 k141_116203_50 61774 62694 + GT2
Gene ID: k141_116203_38
Type: CAZyme
Location: 45018 - 46583 (+)
Gene ID: k141_116203_39
Type: pfam
Location: 46775 - 47329 (+)
Gene ID: k141_116203_40
Type: TC
Location: 47340 - 48155 (+)
Gene ID: k141_116203_41
Type: TC
Location: 48274 - 49527 (+)
Gene ID: k141_116203_42
Type: pfam
Location: 49534 - 50463 (+)
Gene ID: k141_116203_43
Type:
Location: 50460 - 51695 (+)
Gene ID: k141_116203_44
Type: CAZyme
Location: 51697 - 54171 (+)
Gene ID: k141_116203_45
Type: peptidase
Location: 54235 - 55488 (-)
Gene ID: k141_116203_46
Type: CAZyme
Location: 55751 - 57619 (+)
Gene ID: k141_116203_47
Type: CAZyme
Location: 57629 - 58585 (+)
Gene ID: k141_116203_48
Type: TC
Location: 58814 - 60217 (+)
Gene ID: k141_116203_49
Type: pfam
Location: 60232 - 61620 (+)
Gene ID: k141_116203_50
Type: CAZyme
Location: 61774 - 62694 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_116203_38 vegan > omnivore 1.23326 0.00694
k141_116203_41 vegan > omnivore 1.12372 0.00694
k141_116203_50 vegan > omnivore 1.10250 0.00694

🧭 Explore Read Mapping of CGC

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