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Cluster: GH139_maxbin.013_sub_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_110085 k141_110085_1 169 948 + 3.A.1.9.1
TC k141_110085 k141_110085_2 941 2491 + 3.A.1.9.1
CAZyme k141_110085 k141_110085_3 2591 4582 - GH31_1
CAZyme k141_110085 k141_110085_4 4676 6349 - GH13_31
TC k141_110085 k141_110085_5 6453 7295 - 3.A.1.1.28
TC k141_110085 k141_110085_6 7292 8179 - 3.A.1.1.28
TC k141_110085 k141_110085_7 8310 9575 - 3.A.1.1.28
Gene ID: k141_110085_1
Type: TC
Location: 169 - 948 (+)
Gene ID: k141_110085_2
Type: TC
Location: 941 - 2491 (+)
Gene ID: k141_110085_3
Type: CAZyme
Location: 2591 - 4582 (-)
Gene ID: k141_110085_4
Type: CAZyme
Location: 4676 - 6349 (-)
Gene ID: k141_110085_5
Type: TC
Location: 6453 - 7295 (-)
Gene ID: k141_110085_6
Type: TC
Location: 7292 - 8179 (-)
Gene ID: k141_110085_7
Type: TC
Location: 8310 - 9575 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_110085_1 vegan > omnivore 1.08337 0.00694
k141_110085_5 vegan > omnivore 1.34118 0.00694
k141_110085_6 vegan > omnivore 1.04320 0.00694

🧭 Explore Read Mapping of CGC

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