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Cluster: GH139_maxbin.013_sub_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_149428 k141_149428_17 17733 19043 - GH29
TC k141_149428 k141_149428_18 19126 19986 - 3.A.1.1.47
TC k141_149428 k141_149428_19 20000 20935 - 3.A.1.1.47
TC k141_149428 k141_149428_20 21019 22296 - 3.A.1.1.47
TC k141_149428 k141_149428_21 22475 23734 - 3.A.1.1.47
Gene ID: k141_149428_17
Type: CAZyme
Location: 17733 - 19043 (-)
Gene ID: k141_149428_18
Type: TC
Location: 19126 - 19986 (-)
Gene ID: k141_149428_19
Type: TC
Location: 20000 - 20935 (-)
Gene ID: k141_149428_20
Type: TC
Location: 21019 - 22296 (-)
Gene ID: k141_149428_21
Type: TC
Location: 22475 - 23734 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_149428_20 vegetarian > omnivore 1.02087 0.04303

🧭 Explore Read Mapping of CGC

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