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Cluster: GH139_maxbin.013_sub_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_149147 k141_149147_3 1225 2067 + 9.B.106.2.2
NULL(UNKNOWN) k141_149147 k141_149147_4 2081 3277 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_149147 k141_149147_5 3703 6717 + GH3
TF k141_149147 k141_149147_6 6897 7607 + LytTR
pfam k141_149147 k141_149147_7 7604 8944 + HATPase_c_5
TC k141_149147 k141_149147_8 9334 11037 + 2.A.114.1.3
TC k141_149147 k141_149147_9 11113 12456 - 2.A.66.1.28
Gene ID: k141_149147_3
Type: TC
Location: 1225 - 2067 (+)
Gene ID: k141_149147_4
Type:
Location: 2081 - 3277 (+)
Gene ID: k141_149147_5
Type: CAZyme
Location: 3703 - 6717 (+)
Gene ID: k141_149147_6
Type: TF
Location: 6897 - 7607 (+)
Gene ID: k141_149147_7
Type: pfam
Location: 7604 - 8944 (+)
Gene ID: k141_149147_8
Type: TC
Location: 9334 - 11037 (+)
Gene ID: k141_149147_9
Type: TC
Location: 11113 - 12456 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_149147_5 vegan > omnivore 1.02278 0.00694
k141_149147_6 vegetarian > omnivore 1.22171 0.03215

🧭 Explore Read Mapping of CGC

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