dbCAN Logo

Cluster: GH139_maxbin.013_sub_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_153956 k141_153956_71 77047 78333 + 3.A.1.1.4
TC k141_153956 k141_153956_72 78567 79466 + 3.A.1.1.4
TC k141_153956 k141_153956_73 79459 80286 + 3.A.1.1.4
CAZyme k141_153956 k141_153956_74 80516 83641 + GH2
CAZyme k141_153956 k141_153956_75 83717 85741 + GH42
TF k141_153956 k141_153956_76 85849 86832 + HTH_AraC
pfam k141_153956 k141_153956_77 87011 88315 + Bmp
TC k141_153956 k141_153956_78 88566 90098 + 3.A.1.2.17
TC k141_153956 k141_153956_79 90099 91196 + 3.A.1.2.10
TC k141_153956 k141_153956_80 91197 92189 + 3.A.1.2.17
Gene ID: k141_153956_71
Type: TC
Location: 77047 - 78333 (+)
Gene ID: k141_153956_72
Type: TC
Location: 78567 - 79466 (+)
Gene ID: k141_153956_73
Type: TC
Location: 79459 - 80286 (+)
Gene ID: k141_153956_74
Type: CAZyme
Location: 80516 - 83641 (+)
Gene ID: k141_153956_75
Type: CAZyme
Location: 83717 - 85741 (+)
Gene ID: k141_153956_76
Type: TF
Location: 85849 - 86832 (+)
Gene ID: k141_153956_77
Type: pfam
Location: 87011 - 88315 (+)
Gene ID: k141_153956_78
Type: TC
Location: 88566 - 90098 (+)
Gene ID: k141_153956_79
Type: TC
Location: 90099 - 91196 (+)
Gene ID: k141_153956_80
Type: TC
Location: 91197 - 92189 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_153956_71 vegan > omnivore 1.03283 0.00694
k141_153956_73 vegan > omnivore 1.12537 0.00694

🧭 Explore Read Mapping of CGC

← Back to Cluster List