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Cluster: GH139_maxbin.013_sub_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_52211 k141_52211_11 11918 13168 + 3.A.1.1.40
TC k141_52211 k141_52211_12 13243 14148 + 3.A.1.1.41
TC k141_52211 k141_52211_13 14141 15025 + 3.A.1.1.36
CAZyme k141_52211 k141_52211_14 15053 17524 + GH116
CAZyme k141_52211 k141_52211_15 17527 18999 + GH32
pfam k141_52211 k141_52211_16 19094 19711 - Hexapep | Mac | Hexapep_2 | Hexapep_2
STP k141_52211 k141_52211_17 19946 21256 + SBP_bac_1
TC k141_52211 k141_52211_18 21322 22218 + 3.A.1.1.47
TC k141_52211 k141_52211_19 22222 23016 + 3.A.1.1.41
TC k141_52211 k141_52211_20 23037 24917 + 8.A.59.2.1
Gene ID: k141_52211_11
Type: TC
Location: 11918 - 13168 (+)
Gene ID: k141_52211_12
Type: TC
Location: 13243 - 14148 (+)
Gene ID: k141_52211_13
Type: TC
Location: 14141 - 15025 (+)
Gene ID: k141_52211_14
Type: CAZyme
Location: 15053 - 17524 (+)
Gene ID: k141_52211_15
Type: CAZyme
Location: 17527 - 18999 (+)
Gene ID: k141_52211_16
Type: pfam
Location: 19094 - 19711 (-)
Gene ID: k141_52211_17
Type: STP
Location: 19946 - 21256 (+)
Gene ID: k141_52211_18
Type: TC
Location: 21322 - 22218 (+)
Gene ID: k141_52211_19
Type: TC
Location: 22222 - 23016 (+)
Gene ID: k141_52211_20
Type: TC
Location: 23037 - 24917 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_52211_11 vegan > omnivore 2.51646 0.00694
k141_52211_11 vegetarian > omnivore 1.97524 0.01924
k141_52211_12 vegan > omnivore 1.40960 0.00694
k141_52211_14 vegan > omnivore 2.62651 0.00694
k141_52211_14 vegetarian > omnivore 1.95565 0.01924
k141_52211_15 vegan > omnivore 1.59906 0.00694
k141_52211_17 vegetarian > omnivore 1.32570 0.04640
k141_52211_18 vegan > omnivore 1.04821 0.00694
k141_52211_18 vegetarian > omnivore 1.97482 0.04326
k141_52211_19 vegan > omnivore 1.95400 0.00694
k141_52211_19 vegetarian > omnivore 2.61726 0.01287
k141_52211_20 vegan > omnivore 1.19390 0.00694

🧭 Explore Read Mapping of CGC

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