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Cluster: GH134_126_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_99945 k141_99945_31 36083 37801 + 3.A.1.1.22
pfam k141_99945 k141_99945_32 37810 39174 + RDD
TF k141_99945 k141_99945_33 39171 40043 - HTH_AraC | HTH_AraC
TC k141_99945 k141_99945_34 40160 41131 + 3.A.1.1.10
TC k141_99945 k141_99945_35 41138 41995 + 3.A.1.1.29
NULL(UNKNOWN) k141_99945 k141_99945_36 42008 43759 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_99945 k141_99945_37 43756 45996 + GH110
CAZyme k141_99945 k141_99945_38 45993 48980 + GH110
NULL(UNKNOWN) k141_99945 k141_99945_39 49039 51093 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_99945 k141_99945_40 51233 52687 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_99945 k141_99945_41 52684 54957 + GH78
Gene ID: k141_99945_31
Type: TC
Location: 36083 - 37801 (+)
Gene ID: k141_99945_32
Type: pfam
Location: 37810 - 39174 (+)
Gene ID: k141_99945_33
Type: TF
Location: 39171 - 40043 (-)
Gene ID: k141_99945_34
Type: TC
Location: 40160 - 41131 (+)
Gene ID: k141_99945_35
Type: TC
Location: 41138 - 41995 (+)
Gene ID: k141_99945_36
Type:
Location: 42008 - 43759 (+)
Gene ID: k141_99945_37
Type: CAZyme
Location: 43756 - 45996 (+)
Gene ID: k141_99945_38
Type: CAZyme
Location: 45993 - 48980 (+)
Gene ID: k141_99945_39
Type:
Location: 49039 - 51093 (+)
Gene ID: k141_99945_40
Type:
Location: 51233 - 52687 (+)
Gene ID: k141_99945_41
Type: CAZyme
Location: 52684 - 54957 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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