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Cluster: GH132_59_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_155857 k141_155857_71 70090 72897 - 3.A.5.1.3
NULL(UNKNOWN) k141_155857 k141_155857_72 73024 73620 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_155857 k141_155857_73 73811 74473 + 9.B.18.1.2
CAZyme k141_155857 k141_155857_74 74519 77578 + GH2
pfam k141_155857 k141_155857_75 77706 79130 + Radical_SAM
TC k141_155857 k141_155857_76 79206 80468 + 9.A.40.2.2
Gene ID: k141_155857_71
Type: TC
Location: 70090 - 72897 (-)
Gene ID: k141_155857_72
Type:
Location: 73024 - 73620 (-)
Gene ID: k141_155857_73
Type: TC
Location: 73811 - 74473 (+)
Gene ID: k141_155857_74
Type: CAZyme
Location: 74519 - 77578 (+)
Gene ID: k141_155857_75
Type: pfam
Location: 77706 - 79130 (+)
Gene ID: k141_155857_76
Type: TC
Location: 79206 - 80468 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_155857_75 vegetarian > omnivore 2.13538 0.04492

🧭 Explore Read Mapping of CGC

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