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Cluster: GH132_59_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_201764 k141_201764_22 25992 27182 + GT4
TC k141_201764 k141_201764_23 27243 27656 - 3.A.2.1.5
TC k141_201764 k141_201764_24 27669 29051 - 3.A.2.1.5
TC k141_201764 k141_201764_25 29099 29983 - 3.A.2.1.5
TC k141_201764 k141_201764_26 29976 31994 - 3.A.2.1.6
pfam k141_201764 k141_201764_27 31987 32475 - ATP-synt_B
TC k141_201764 k141_201764_28 32514 32741 - 3.A.2.1.5
TC k141_201764 k141_201764_29 32807 33634 - 3.A.2.1.2
Gene ID: k141_201764_22
Type: CAZyme
Location: 25992 - 27182 (+)
Gene ID: k141_201764_23
Type: TC
Location: 27243 - 27656 (-)
Gene ID: k141_201764_24
Type: TC
Location: 27669 - 29051 (-)
Gene ID: k141_201764_25
Type: TC
Location: 29099 - 29983 (-)
Gene ID: k141_201764_26
Type: TC
Location: 29976 - 31994 (-)
Gene ID: k141_201764_27
Type: pfam
Location: 31987 - 32475 (-)
Gene ID: k141_201764_28
Type: TC
Location: 32514 - 32741 (-)
Gene ID: k141_201764_29
Type: TC
Location: 32807 - 33634 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_201764_28 vegetarian > omnivore 1.08225 0.04492
k141_201764_28 vegetarian > vegan 1.65214 0.03591

🧭 Explore Read Mapping of CGC

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