Cluster: GH128_bin.65_CGC21
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: GH128_bin.65
- CGC Family ID: CGCFAM_06832
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_151251 | k141_151251_146 | 143915 | 145804 | - | 3.D.1.5.1 |
| TC | k141_151251 | k141_151251_147 | 145794 | 146279 | - | 3.D.1.5.1 |
| TC | k141_151251 | k141_151251_148 | 146492 | 147370 | - | 3.A.1.1.48 |
| TC | k141_151251 | k141_151251_149 | 147371 | 148348 | - | 3.A.1.1.23 |
| NULL(UNKNOWN) | k141_151251 | k141_151251_150 | 148436 | 149836 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_151251 | k141_151251_151 | 149940 | 150950 | - | LacI |
| CAZyme | k141_151251 | k141_151251_152 | 151340 | 153778 | + | GH94 |
| TC | k141_151251 | k141_151251_153 | 153842 | 155575 | - | 3.A.1.135.5 |
| TC | k141_151251 | k141_151251_154 | 155578 | 157302 | - | 3.A.1.135.5 |
| TC | k141_151251 | k141_151251_155 | 157286 | 159505 | - | 3.A.1.106.2 |
| pfam | k141_151251 | k141_151251_156 | 159529 | 160071 | - | DUF1854 |
| TC | k141_151251 | k141_151251_157 | 160068 | 162392 | - | 3.A.1.135.5 |
| STP | k141_151251 | k141_151251_158 | 162549 | 163151 | - | TetR_N |
| TC | k141_151251 | k141_151251_159 | 163162 | 165153 | - | 9.B.74.1.4 |
Gene ID: k141_151251_146
Type: TC
Location: 143915 - 145804 (-)
Type: TC
Location: 143915 - 145804 (-)
Gene ID: k141_151251_147
Type: TC
Location: 145794 - 146279 (-)
Type: TC
Location: 145794 - 146279 (-)
Gene ID: k141_151251_148
Type: TC
Location: 146492 - 147370 (-)
Type: TC
Location: 146492 - 147370 (-)
Gene ID: k141_151251_149
Type: TC
Location: 147371 - 148348 (-)
Type: TC
Location: 147371 - 148348 (-)
Gene ID: k141_151251_150
Type:
Location: 148436 - 149836 (-)
Type:
Location: 148436 - 149836 (-)
Gene ID: k141_151251_151
Type: TF
Location: 149940 - 150950 (-)
Type: TF
Location: 149940 - 150950 (-)
Gene ID: k141_151251_152
Type: CAZyme
Location: 151340 - 153778 (+)
Type: CAZyme
Location: 151340 - 153778 (+)
Gene ID: k141_151251_153
Type: TC
Location: 153842 - 155575 (-)
Type: TC
Location: 153842 - 155575 (-)
Gene ID: k141_151251_154
Type: TC
Location: 155578 - 157302 (-)
Type: TC
Location: 155578 - 157302 (-)
Gene ID: k141_151251_155
Type: TC
Location: 157286 - 159505 (-)
Type: TC
Location: 157286 - 159505 (-)
Gene ID: k141_151251_156
Type: pfam
Location: 159529 - 160071 (-)
Type: pfam
Location: 159529 - 160071 (-)
Gene ID: k141_151251_157
Type: TC
Location: 160068 - 162392 (-)
Type: TC
Location: 160068 - 162392 (-)
Gene ID: k141_151251_158
Type: STP
Location: 162549 - 163151 (-)
Type: STP
Location: 162549 - 163151 (-)
Gene ID: k141_151251_159
Type: TC
Location: 163162 - 165153 (-)
Type: TC
Location: 163162 - 165153 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp934322085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_151251_149 | vegan > omnivore | 1.18473 | 0.00701 |
| k141_151251_158 | vegan > omnivore | 1.00322 | 0.00701 |