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Cluster: GH128_bin.65_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_188346 k141_188346_110 130750 131544 - 3.D.6.1.2
TC k141_188346 k141_188346_111 131562 132137 - 3.D.6.1.2
TC k141_188346 k141_188346_112 132134 132781 - 3.D.6.1.2
pfam k141_188346 k141_188346_113 132774 133427 - FMN_bind
TC k141_188346 k141_188346_114 133420 134409 - 3.D.6.1.2
TC k141_188346 k141_188346_115 134464 135786 - 3.D.6.1.2
TF k141_188346 k141_188346_116 135961 136266 - HTH_psq
CAZyme k141_188346 k141_188346_117 136346 139000 - GH10
TC k141_188346 k141_188346_118 139110 140759 - 2.A.58.2.2
Gene ID: k141_188346_110
Type: TC
Location: 130750 - 131544 (-)
Gene ID: k141_188346_111
Type: TC
Location: 131562 - 132137 (-)
Gene ID: k141_188346_112
Type: TC
Location: 132134 - 132781 (-)
Gene ID: k141_188346_113
Type: pfam
Location: 132774 - 133427 (-)
Gene ID: k141_188346_114
Type: TC
Location: 133420 - 134409 (-)
Gene ID: k141_188346_115
Type: TC
Location: 134464 - 135786 (-)
Gene ID: k141_188346_116
Type: TF
Location: 135961 - 136266 (-)
Gene ID: k141_188346_117
Type: CAZyme
Location: 136346 - 139000 (-)
Gene ID: k141_188346_118
Type: TC
Location: 139110 - 140759 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_188346_112 vegan > omnivore 1.24392 0.00701

🧭 Explore Read Mapping of CGC

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