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Cluster: GH123_97_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_348152 k141_348152_23 25919 28909 + 1.B.14.6.1
pfam k141_348152 k141_348152_24 28949 30478 + SusD_RagB | SusD-like_3
pfam k141_348152 k141_348152_25 30515 32527 + SusE | DUF5111 | DUF5114
CAZyme k141_348152 k141_348152_26 32568 33647 + GH53
TC k141_348152 k141_348152_27 33866 35194 + 9.B.126.2.2
pfam k141_348152 k141_348152_28 35954 38122 + Radical_SAM_N | DUF3362
CAZyme k141_348152 k141_348152_29 38242 40008 - GH5_4
CAZyme k141_348152 k141_348152_30 40024 41835 - GH5_4
Gene ID: k141_348152_23
Type: TC
Location: 25919 - 28909 (+)
Gene ID: k141_348152_24
Type: pfam
Location: 28949 - 30478 (+)
Gene ID: k141_348152_25
Type: pfam
Location: 30515 - 32527 (+)
Gene ID: k141_348152_26
Type: CAZyme
Location: 32568 - 33647 (+)
Gene ID: k141_348152_27
Type: TC
Location: 33866 - 35194 (+)
Gene ID: k141_348152_28
Type: pfam
Location: 35954 - 38122 (+)
Gene ID: k141_348152_29
Type: CAZyme
Location: 38242 - 40008 (-)
Gene ID: k141_348152_30
Type: CAZyme
Location: 40024 - 41835 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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