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Cluster: GH116_40_sub_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_29049 k141_29049_5 5859 8309 - 4.A.1.1.8
NULL(UNKNOWN) k141_29049 k141_29049_6 8331 8450 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_29049 k141_29049_7 8534 9253 + GntR
TC k141_29049 k141_29049_8 9560 10876 + 3.A.1.1.45
TC k141_29049 k141_29049_9 10964 11818 + 3.A.1.1.45
TC k141_29049 k141_29049_10 11818 12657 + 3.A.1.1.45
TC k141_29049 k141_29049_11 12726 13925 + 3.A.1.1.22
CAZyme k141_29049 k141_29049_12 14303 16570 - GT35
CAZyme k141_29049 k141_29049_13 16698 18203 - GH77
Gene ID: k141_29049_5
Type: TC
Location: 5859 - 8309 (-)
Gene ID: k141_29049_6
Type:
Location: 8331 - 8450 (+)
Gene ID: k141_29049_7
Type: TF
Location: 8534 - 9253 (+)
Gene ID: k141_29049_8
Type: TC
Location: 9560 - 10876 (+)
Gene ID: k141_29049_9
Type: TC
Location: 10964 - 11818 (+)
Gene ID: k141_29049_10
Type: TC
Location: 11818 - 12657 (+)
Gene ID: k141_29049_11
Type: TC
Location: 12726 - 13925 (+)
Gene ID: k141_29049_12
Type: CAZyme
Location: 14303 - 16570 (-)
Gene ID: k141_29049_13
Type: CAZyme
Location: 16698 - 18203 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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