Cluster: GH116_40_sub_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: GH116_40_sub
- CGC Family ID: CGCFAM_03494
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_43161 | k141_43161_7 | 6860 | 8044 | - | 2.A.50.2.1 |
| TC | k141_43161 | k141_43161_8 | 8057 | 9595 | - | 4.C.1.1.6 |
| NULL(UNKNOWN) | k141_43161 | k141_43161_9 | 9680 | 9844 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_43161 | k141_43161_10 | 9831 | 11066 | - | DltD |
| CAZyme | k141_43161 | k141_43161_11 | 11296 | 14001 | - | GT2 |
Gene ID: k141_43161_7
Type: TC
Location: 6860 - 8044 (-)
Type: TC
Location: 6860 - 8044 (-)
Gene ID: k141_43161_8
Type: TC
Location: 8057 - 9595 (-)
Type: TC
Location: 8057 - 9595 (-)
Gene ID: k141_43161_9
Type:
Location: 9680 - 9844 (-)
Type:
Location: 9680 - 9844 (-)
Gene ID: k141_43161_10
Type: pfam
Location: 9831 - 11066 (-)
Type: pfam
Location: 9831 - 11066 (-)
Gene ID: k141_43161_11
Type: CAZyme
Location: 11296 - 14001 (-)
Type: CAZyme
Location: 11296 - 14001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.