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Cluster: GH116_40_sub_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_223615 k141_223615_10 7500 8669 - CE9
STP k141_223615 k141_223615_11 8788 9954 - SIS | SIS
TF k141_223615 k141_223615_12 10069 10800 - GntR
TC k141_223615 k141_223615_13 10986 12068 - 4.A.6.1.4
TC k141_223615 k141_223615_14 12058 12858 - 4.A.6.1.4
TC k141_223615 k141_223615_15 12949 13431 - 4.A.6.1.4
pfam k141_223615 k141_223615_16 13468 13749 - YajC
TC k141_223615 k141_223615_17 13749 14192 - 4.A.6.1.16
Gene ID: k141_223615_10
Type: CAZyme
Location: 7500 - 8669 (-)
Gene ID: k141_223615_11
Type: STP
Location: 8788 - 9954 (-)
Gene ID: k141_223615_12
Type: TF
Location: 10069 - 10800 (-)
Gene ID: k141_223615_13
Type: TC
Location: 10986 - 12068 (-)
Gene ID: k141_223615_14
Type: TC
Location: 12058 - 12858 (-)
Gene ID: k141_223615_15
Type: TC
Location: 12949 - 13431 (-)
Gene ID: k141_223615_16
Type: pfam
Location: 13468 - 13749 (-)
Gene ID: k141_223615_17
Type: TC
Location: 13749 - 14192 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_223615_16 vegan > omnivore 1.26450 0.00364
k141_223615_17 vegan > omnivore 1.06133 0.00364

🧭 Explore Read Mapping of CGC

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