Cluster: GH116_40_sub_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: GH116_40_sub
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_57785 | k141_57785_9 | 8874 | 11201 | - | 9.A.8.1.6 |
| TC | k141_57785 | k141_57785_10 | 11325 | 11546 | - | 9.A.8.1.6 |
| STP | k141_57785 | k141_57785_11 | 11586 | 11828 | - | FeoA |
| STP | k141_57785 | k141_57785_12 | 12017 | 12265 | - | PTS-HPr |
| TC | k141_57785 | k141_57785_13 | 12688 | 14151 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | k141_57785 | k141_57785_14 | 14305 | 14760 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_57785 | k141_57785_15 | 14764 | 17772 | - | GH2 |
Gene ID: k141_57785_9
Type: TC
Location: 8874 - 11201 (-)
Type: TC
Location: 8874 - 11201 (-)
Gene ID: k141_57785_10
Type: TC
Location: 11325 - 11546 (-)
Type: TC
Location: 11325 - 11546 (-)
Gene ID: k141_57785_11
Type: STP
Location: 11586 - 11828 (-)
Type: STP
Location: 11586 - 11828 (-)
Gene ID: k141_57785_12
Type: STP
Location: 12017 - 12265 (-)
Type: STP
Location: 12017 - 12265 (-)
Gene ID: k141_57785_13
Type: TC
Location: 12688 - 14151 (-)
Type: TC
Location: 12688 - 14151 (-)
Gene ID: k141_57785_14
Type:
Location: 14305 - 14760 (-)
Type:
Location: 14305 - 14760 (-)
Gene ID: k141_57785_15
Type: CAZyme
Location: 14764 - 17772 (-)
Type: CAZyme
Location: 14764 - 17772 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.