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Cluster: GH102_22_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_207361 k141_207361_6 5628 7127 - GH77
pfam k141_207361 k141_207361_7 7139 7966 - Exo_endo_phos
TC k141_207361 k141_207361_8 7985 9634 - 4.A.1.1.11
TF k141_207361 k141_207361_9 9900 10925 + LacI
pfam k141_207361 k141_207361_10 11515 11793 - Bac_DNA_binding
TC k141_207361 k141_207361_11 11881 12798 - 2.A.7.3.42
Gene ID: k141_207361_6
Type: CAZyme
Location: 5628 - 7127 (-)
Gene ID: k141_207361_7
Type: pfam
Location: 7139 - 7966 (-)
Gene ID: k141_207361_8
Type: TC
Location: 7985 - 9634 (-)
Gene ID: k141_207361_9
Type: TF
Location: 9900 - 10925 (+)
Gene ID: k141_207361_10
Type: pfam
Location: 11515 - 11793 (-)
Gene ID: k141_207361_11
Type: TC
Location: 11881 - 12798 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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