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Cluster: GH102_22_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_48987 k141_48987_92 94413 95738 - 9.A.40.2.1
TF k141_48987 k141_48987_93 96094 96882 + TrmB
CAZyme k141_48987 k141_48987_94 96897 98402 + GH77
CAZyme k141_48987 k141_48987_95 98429 100816 + GT35
CAZyme k141_48987 k141_48987_96 100840 102747 + CBM48 | GH13_9
pfam k141_48987 k141_48987_97 102807 103952 + NTP_transferase | Hexapep_GlmU
pfam k141_48987 k141_48987_98 103975 105138 + NTP_transferase | Hexapep_GlmU
CAZyme k141_48987 k141_48987_99 105166 106545 + GT5
Gene ID: k141_48987_92
Type: TC
Location: 94413 - 95738 (-)
Gene ID: k141_48987_93
Type: TF
Location: 96094 - 96882 (+)
Gene ID: k141_48987_94
Type: CAZyme
Location: 96897 - 98402 (+)
Gene ID: k141_48987_95
Type: CAZyme
Location: 98429 - 100816 (+)
Gene ID: k141_48987_96
Type: CAZyme
Location: 100840 - 102747 (+)
Gene ID: k141_48987_97
Type: pfam
Location: 102807 - 103952 (+)
Gene ID: k141_48987_98
Type: pfam
Location: 103975 - 105138 (+)
Gene ID: k141_48987_99
Type: CAZyme
Location: 105166 - 106545 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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